PLX038 in Primary Central Nervous System Tumors Containing MYC or MYCN Amplifications

Last updated: May 12, 2026
Sponsor: National Cancer Institute (NCI)
Overall Status: Active - Recruiting

Phase

1/2

Condition

Brain Tumor

Cancer/tumors

Brain Cancer

Treatment

PLX038

Clinical Study ID

NCT06161519
10001534
001534-C
  • Ages 18-120
  • All Genders

Study Summary

Background:

About 90,000 new cases of brain and spinal cord tumors are diagnosed annually in the United States. Most of these tumors are benign; however, about 30% are malignant, and 35% of people with malignant tumors in the brain and spinal cord will die within 5 years. Many of these people have changes in certain genes (MYC or MYCN) that drive the development of their cancers.

Objective:

To test a study drug (PLX038) in people with tumors of the brain or spinal cord.

Eligibility:

People aged 18 years or older with a tumor of the brain or spinal cord. Some participants must also have tumors with changes in the MYC or MYCN genes.

Design:

Participants will be screened. They will have a physical exam and blood tests. They will have imaging scans and a test of their heart function. They may need to have a biopsy: A sample of tissue will be removed from their tumor.

PLX038 is given through a tube attached to a needle inserted into a vein in the arm. All participants will receive PLX038 on the first day of each 21-day treatment cycle. They will take a second drug 3 days later to help reduce the risk of infection; for this drug, participants will be shown how to inject themselves under the skin at home.

Blood tests, imaging scans, and other tests will be repeated during study visits. Hair samples will also be collected during these visits. Some participants may have an additional biopsy.

Study treatment will continue up to 7 months.

Follow-up visits will continue every few months for up to 5 years.

Eligibility Criteria

Inclusion

  • INCLUSION CRITERIA:

  • Participants must have documented pathologic diagnosis of confirmed primary centralnervous system (CNS) tumor with one of the below diagnoses:

  • Cohort Phase I: Any recurrent or progressive primary CNS tumor, regardless ofmolecular features.

  • Cohort Phase IIA: Newly diagnosed MYCN amplified ependymoma after surgery andradiation.

  • Cohort Phase IIB:

  • Recurrent or progressive MYCN amplified ependymoma, OR

  • Recurrent or progressive medulloblastoma with MYC or MYCN amplifications

  • Cohort Phase IIC: Any other recurrent or progressive primary CNS tumor with MYCor MYCN amplifications.

  • Cohort Phase IID: Any recurrent glioblastoma without MYC or MYCNamplifications.

NOTE 1: Recurrence or progression may involve CNS, extra CNS, or both.

NOTE 2: The presence of MYCN or MYC amplification will be determined by NSR device (via next-generation sequencing panel TruSight(TM) Oncology 500) and the threshold of MYCN or MYC amplification for eligibility purposes is a fold change (FC) of >= 2.5X (5 copies) with a minimum tumor content of 20%.

  • Participants must have archival tumor tissue (either a block or 15 formalin-fixedparaffin-embedded (FFPE) unstained slides) available for NCI LP review of MYC orMYCN amplification status and for correlative studies:

  • Cohorts Phase I, Phase IIB, Phase IIC, and Phase IID: tumor tissue obtained atany point before trial treatment initiation, but preferably from most recentsurgical resection before study treatment initiation.

  • Cohort Phase IIA: tumor tissue obtained at original diagnosis.

  • Participants in Cohort Phase IIA must have completed surgery followed by radiationat least 4 weeks and no more than 10 weeks from the last dose of radiation prior tostudy treatment initiation.

  • Participants in Cohorts Phase I, Phase IIB, Phase IIC, and Phase IID must havecompleted prior cytotoxic chemotherapy or radiation at least 4 weeks prior to studytreatment initiation (at least 6 weeks if the last regimen included lomustine (CCNU)or carmustine (BCNU); at least 3 weeks if the last regimen included bevacizumab; atleast 4 weeks if the last regimen included a checkpoint inhibitor or any other typeof immunotherapy or cellular therapy; at least 5 half-lives if the last regimenincluded any investigational agent(s). Participants previously treated with PHOTONradiation to at least 2 segments of the spine must have completed radiation at least 12 months before study treatment initiation.

  • Age >= 18 years.

  • Karnofsky >= 70%. NOTE: Participants with severe paraparesis/paraplegia who needminimal assistance for self-care due to their motor deficit but are otherwisefunctionally independent will be eligible.

  • Participants must have adequate organ and marrow function as defined below:

  • leukocytes >=3,000/microliter

  • absolute neutrophil count >1,500/microliter

  • platelets >100,000/microliter

  • hemoglobin >= 9 g/ dL (may be transfused within 2 weeks prior to treatment toachieve this level)

  • total bilirubin within normal institutional limits

  • aspartate aminotransferase (AST) / alanine aminotransferase (ALT) <2.5 Xinstitutional upper limit of normal (ULN)

  • creatinine within normal institutional limits OR

  • estimated glomerular filtrate rate (eGFR) using chronic kidney diseaseepidemiology collaboration) (CKD-EPI) equation:>= 60 mL/min/1.73 m^2 forparticipants with creatinine levels above institutional normal

  • Women of child-bearing potential (WOCBP) and those who can father children mustagree to use effective contraception (barrier, hormonal contraception, intrauterinedevice (IUD), surgical sterilization, barrier at the study entry, for the durationof study treatment and up to 6 months (WOCBP) and 3 months (those who can fatherchildren) after the last dose of study treatment.

  • Breastfeeding participants must be willing to discontinue breastfeeding from studytreatment initiation through 6 months after the last dose of the study drug.

  • Ability to self-report symptoms and physical function as determined by assessment ofthe clinical team performed at screening.

  • Participants must be able to understand and willing to sign a written informedconsent document.

Exclusion

EXCLUSION CRITERIA:

  • History of allergic reactions to compounds of similar chemical composition toPLX038.

  • Major surgery within 2 weeks prior to study treatment initiation. NOTE: The surgeryis considered major if a mesenchymal barrier is opened (pleural cavity, peritoneum,meninges).

  • Participants who require treatment with strong inhibitors or inducers of CYP3A orwith UGT1A1 inhibitors during the planned period of investigational treatment withPLX038. Lists including medications and substances known or with the potential tointeract with CYP3A or UGT1A1 are provided inhttps://drug-interactions.medicine.iu.edu/maintable.

  • History of treatment with pegylated topoisomerase inhibitors.

  • Has documented >= grade 2 PHOTON craniospinal irradiation (CSI) induced GIdysfunction.

  • Participants with history of homozygous for the UGT1A1*28 variant allele withseverely reduced UGT1A1 activity.

  • Participants positive for Human immunodeficiency virus (HIV), Hepatitis C virus (HCV), and Hepatitis B virus (HBV).

  • Pregnancy (confirmed with beta human chorionic gonadotropin (beta-HCG) serum orurine pregnancy test performed in females of childbearing potential at screening).

  • Participants unable to have MRIs.

  • Prior or concurrent malignancy unless its natural history or treatment does not havethe potential to interfere with the safety or efficacy assessment of theinvestigational regimen (https://deainfo.nci.nih.gov/advisory/ctac/1117/4-JournalClinicalOncology.pdf,https://ctep.cancer.gov/protocolDevelopment/docs/CTEP_Broadened_Eligibility_Criteria _Guidance.pdf)

  • Uncontrolled intercurrent illness evaluated by history, weight, and physical examthat would limit compliance with study requirements.

Study Design

Total Participants: 146
Treatment Group(s): 1
Primary Treatment: PLX038
Phase: 1/2
Study Start date:
January 31, 2024
Estimated Completion Date:
November 14, 2033

Study Description

Background:

  • The MYC genes encode a family of transcription factors (MYC-C, MYC-N, and MYC-L) that regulate the expression of a wide range of genes involved in cell division in development and adulthood.

  • Supraphysiologic levels of MYC are oncogenic and drive aggressive behavior across a range of human malignancies. Amplifications of MYC and MYCN are seen in multiple types of primary central nervous system (CNS) tumors, including high-grade gliomas, medulloblastomas, and ependymomas.

  • These CNS tumors are rare and there are limited prospective data to inform treatment choices and few efficacious options. At present, they are typically treated with maximal safe surgical resection followed by external beam radiation therapy, with the variable inclusion of cytotoxic chemotherapy regimens as first-line treatment and/or at recurrence. These "standard" options have shown limited to no antitumor activity, leading to an extremely poor prognosis.

  • MYC-driven increase in transcription induces the formation of topoisome complexes (MYC-C/N, Topoisomerase 1 (TOP1), Topoisomerase 2 (TOP2), DNA) that are essential to managing the torsional strain that would otherwise oppose transcription and replication.

  • PLX038 is a PEGylated macromolecule that contains 4 molecules of SN-38, the active metabolite of irinotecan, that is currently being investigated in non-CNS solid tumor trials. SN38 binds to and inhibits topoisomerase 1 and the unique formulation of PLX038 lead to a longer half-life, which is thought to increase tumor accumulation and potentially decrease toxicity.

Objectives:

  • Phase I: To confirm the recommended Phase II dose (RP2D) of PLX038 in participants with progressive or recurrent primary CNS tumors.

  • Phase II: To assess the efficacy of PLX038 at RP2D in primary CNS tumors based on MYC or MYCN amplifications as measured by:

    • Progression-free survival (PFS) for Cohort Phase IIA (adjuvant treatment), and

    • Disease control rate (DCR), defined as confirmed complete response (CR) / partial response (PR) or durable stable disease (SD) (NOTE: Durable SD is SD lasting for at least 6 months) for Cohorts Phase IIB and Phase IIC (treatment for recurrence with a MYC or MYCN amplification).

    • Progression free Survival at 6 months (PFS6) for Cohort phase IID (recurrent glioblastoma without a MYC or MYCN amplification)

Eligibility:

  • Subjects with histologically confirmed primary CNS tumors corresponding to any progressive or recurrent tumor type (Phase I) or one of the following tumor types (Phase II):

    • Cohort Phase IIA: Newly diagnosed MYCN amplified ependymoma post resection and radiotherapy.

    • Cohort Phase IIB: Recurrent or progressive MYCN amplified ependymoma or medulloblastoma with MYC or MYCN amplifications.

    • Cohort Phase IIC: All other recurrent or progressive primary CNS tumors containing MYC or MYCN amplifications.

    • Cohort Phase IID: Recurrent glioblastoma that does not contain MYC or MYCN amplifications.

  • Age >= 18 years.

  • Karnofsky Performance Status >= 70%.

  • Ability to self-report symptoms and physical function as determined by assessment of the clinical team.

  • Tumor tissue availability for central review and correlative studies.

Design:

This is an open-label phase I/II clinical trial.

  • During Phase I RP2D and maximum tolerated dose (MTD) of PLX038 will be estimated.

  • In the Phase II component, participants will be treated with the TOP1 inhibitor PLX038 at the RP2D intravenously every 3 weeks (+/- 3 days, = 1 cycle). The Phase II study will be comprised of 4 independent disease cohorts that can enroll simultaneously and will be evaluated independently for efficacy.

  • Treatment will continue until progression or unacceptable toxicity, or a maximum of 10 cycles, whichever occurs first.

  • Safety and toxicity assessments will occur prior to each treatment cycle (every 3 weeks).

  • Efficacy (by magnetic resonance (MR) imaging and/or other imaging techniques if extra CNS tumor is present) and patient-reported outcomes measures (PROs): participant reported toxicity using predetermined patient-reported outcomes Common Terminology Criteria for Adverse Events (PRO-CTCAE) symptoms, Patient Global Impression of Severity (PGI-S), Patient Global Impression-Change (PGI-C), Overall Side Effect Bother, self-reported symptom severity and interference with daily activities using MD Anderson Symptom Inventory for brain tumor (MDASI-BT), and/or MD Anderson Symptom Inventory for spine tumors (MDASI-SP) questionnaires; self-reported physical functioning using Patient-Reported Outcomes Measurement Information System (PROMIS) Physical Functioning form 10b. PRO-CTCAE, PGI-S, PGI-C, Overall Side Effect Bother, and PROMIS Physical Function 10b will be obtained at baseline and weekly for the first two cycles of treatment then these and all other PRO assessments will be obtained at the time of disease imaging evaluation every 2 cycles (6 weeks). The only exceptions are the PGI-C and Overall Side Effect Bother which will not be obtained at baseline and Day 1 of Cycle 1. PRO measures will be completed prior to participants being informed of imaging results.

  • PLX038 drug distribution will be investigated in peripheral blood and tumor tissue post-treatment administration. Molecular biomarkers of treatment response or resistance will be investigated in an exploratory manner pre and post-treatment (after cycle 2 and after tumor progression) in tumor tissue, hair follicles, and peripheral blood.

Connect with a study center

  • National Institutes of Health Clinical Center

    Bethesda, Maryland 20892
    United States

    Active - Recruiting

  • National Institutes of Health Clinical Center

    Bethesda 4348599, Maryland 4361885 20892
    United States

    Site Not Available

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